|

Figure 3.
Cyanobacterial 16s rRNA phylogeny. Mat sequences are
bold-highlighted. Inset shows ITS variation within 16s rRNA
genotype B'. |
|
Fig. 3
shows a tree of diversity in cyanobacterial 16S rRNA sequences,
with thin lines providing a background of diversity within this
kingdom. The thick lines indicate the diverse cyanobacterial
16S rRNA sequences we detected in a hot spring microbial mat.
Clearly, the mat contains more cyanobacterial diversity than
meets the eye. Again, line lengths separating sequences (in
this case horizontal component only) equate to genetic
differences. The readily cultivated sequence (Isolate OS C1,
S. lividus) is unrelated to the predominant ones, which
comprise a set of closely related sequences we call A/B types.
The difference between type C1 and the A/B types is very large,
certainly representing different species, but more likely
representing differences on the same scale as the difference
between flowering plants and ferns! But, what about the closely
related sequences of the A/B group? By studying the
distribution of these genetic variants along ecological
gradients, we learned that even the most closely related
sequences appear to correspond to ecologically distinct
cyanobacterial populations. Fig. 4 (below) shows different A/B
genotypes at different temperatures and depths. Note the
progression of genotypes from B to B’ to A to B’ to A’’ from low
to high temperature and the subsurface position of genotype A
corresponding to pigment-rich Synechococcus 400-700 µm
below the mat surface. We are currently examining pure cultures
of A/B lineage Synechococcus to evaluate whether, as
predicted from distribution studies, these are temperature- and
light-adapted ecological populations. Together with evidence
from other laboratories, it seems clear that, like plants and
animals (e.g., Fig. 5, left), prokaryote diversity is acted
upon by natural selection to yield ecologically specialized
populations. We term these populations ecotypes, but
they can be taken as species if an ecological concept of species
is applied. [Ward,
1998; Ward et al.,
1998,
2002] |
|